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Table 1 HML10 proviral sequences localized in the human genome GRCh37/hg19 assembly

From: Identification of a novel HERV-K(HML10): comprehensive characterization and comparative analysis in non-human primates provide insights about HML10 proviruses structure and diffusion

Locus Coordinates a Length First reference RVNR b Genomic context Secondary integrations
1p36.13 1:20,253,380–20,259,203 (−) 5824 Vargiu 2016 5836 intergenic
1p22.2 1:89,551,973–89,554,309 2337 this study intergenic
1q22 1:155,661,620–155,669,312 (−) 7693 Vargiu 2016 6073 DAP3 (+)
L1 MB7 (−)
AluSp 155,663,467–155,663,784 (+)
MER11 155,667,171–155,668,256 (−)
6p22.1 6:27,155,300–27,164,058 (+) 8759 Vargiu 2016 2101 intergenic AluY 27,158,573–27,158,903 (+)
AluYc 27,158,904–27,159,195 (+)
AluY 27,159,341–27,159,663 (+)
AluY 27,159,784–27,160,001 (−)
LTR13A 27,162,010–27,163,209 (−)
6p21.33 a) 6:31,952,469–31,958,829 (−) 6361 Tassabehji 1994 2116 C4A (+)
b) 6:31,985,207–31,991,567 (−) 6361 Tassabehji 1994 2115 C4B (+)
6q22.31 6:122,825,990–122,833,238 (−) 7249 Vargiu 2016 2320 PKIB (+) AluY 122,827,840–122,828,145 (−)
AluY 122,829,905–122,830,202 (−)
AluY 122,830,590–122,830,893 (−)
19p13.2 19:7,860,947–7,865,932 (−) 4986 Vargiu 2016 4599 intergenic AluY 7,861,800–7,862,107 (−)
AluY 7,862,886–7,863,179 (+)
AluY 7,863,787–7,864,090 (−)
AluY 7,865,512–7,865,832 (+)
19q13.41 19:52,964,148–52,969,750 (−) 5458 Vargiu 2016 4762 ZNF578 (+)
Yq11.221 Y:15,105,784–15,113,006 (−) 7223 Vargiu 2016 5104 L1M3f (−) LTR2B 15,106,449–15,106,924 (−)
AluY 15,111,205–15,111,507 (−)
  1. aChromosome: start-end (strand). Positions are referred to the human genome sequence, assembly GRCh37/hg19
  2. bIndividual sequences identifiers in the first reference study (Vargiu et al. 2016, [3])